Browse of TCMCG029C10001 protein

CDS

Accession Number	TCMCG029C10001
gbkey	CDS
Protein Id	XP_023755836.1
Location	join(249797..250504,250685..251159,251238..251368,251476..251790,252066..252222,252733..253025,253108..253167,253237..253287,253688..253738,254867..255224,255297..255427,255507..255746)
Gene	LOC111904296
GeneID	111904296
Organism	Lactuca sativa

Protein

Length	989aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA432228
db_source	XM_023900068.1
Definition	CRM-domain containing factor CFM2, chloroplastic isoform X3 [Lactuca sativa]

EGGNOG-MAPPER Annotation

COG_category	L
Description	Chloroplastic group IIA intron splicing facilitator CRS1
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	-
KEGG_ko	-
EC	-
KEGG_Pathway	-
GOs	GO:0000372        [VIEW IN EMBL-EBI] GO:0000373        [VIEW IN EMBL-EBI] GO:0000375        [VIEW IN EMBL-EBI] GO:0000376        [VIEW IN EMBL-EBI] GO:0000377        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0008380        [VIEW IN EMBL-EBI] GO:0009507        [VIEW IN EMBL-EBI] GO:0009532        [VIEW IN EMBL-EBI] GO:0009536        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044435        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTTGCTTCAACAGCCCTCACCTTGTCCTAAAACCCTCCCGAACCCCTTTCTCTCTCACCTTCATCTTCCCCGAAACCTTCTTCCTCGAACCCCTTATCACTTTCGTCGCAGTTCCTTTCTCCTTCACGCATCTGCTTCCTCCGCCGACACCAAAAGTCTACCTCAATCCGCAATTCGAAGAATTGCCGATAAGCTTCGAAGCTTAGGTTACGTCGAAGACGATAGCAATAAGCAACAGTCTTCAGCACCAGAAGTAACCCTAGTTACCTCTCCTGGTGAAATATTTGTCCCGTTACCTAATCGTATACCAAAGTATCGGGTCGGCCACACGCTTGACCCGAGTTGGAGTACGCCTGAGAATCCAGTTCCGGAGCCTGGGTCTGGAAATGCGATAAGAAGGTATCATGAGCTTCGGCGGGAGGTTTGGAAGGAGAAGAAAGAGGAAAAGGTGAAGAGGTCACTAGAGGGAAACGGAGAGAGCGAGAATGTACCGACAATGGCGGAGTTGAAGCTGCCACCGGCGGAGTTAAGAAGGTTGAGAGGGTTGGGAATTGCTGTCAAGCAGAAGCTTAAGATCGGGAAGGCTGGTATCACAGAGGGGATCGTTAATGGAATCCATGAGAGGTGGAGAAGGACTGAACTCGTAAAGATTGTCTGTGAGGATTTGTGTAGATTGAACATGAGGAGAACGCATGATTTACTTGAGAGAAAGACTGGGGGTTTAGTTGTCTGGAGATCTGGAAGCATTATCATATTGTACAGAGGAACAGACTACAAGTATCCTTACTTCTTTGTAAAACCAAATGATGCATCTGTTGATGAACCAATGAGTTCATCTACAAACTCTGAAGATAGTGGTGTTCAAACAAGAACAACAACTGAGCCAGAGCCACCTTTGATTCAAGGAGTGGGTTCAAGAACCAGGGTTCGATTTCAGCTACCTGGTGAGAAACAGCTCATGGAAGAATCTGATCAGCTTTTGCAAGGATTGGGTCCAAGGTTCACTGATTGGTATGGATATGAACCTTTACCAGTTGATGCTGATCTTCTACCTGCAATTGTTCCTGGATACAGGAAACCCTTCAGGCTTCTCCCCTTTGGAGTTCAACCAAAATTAACAAATGATGAGATGACAATTCTTAGAAGACTTGGAAGGCCTTTACCATGTCATTTTGCTTTAGGTAGAAATAGGAAACATCAAGGATTGGCTGCAGCTATTCTAAAGCTTTGGGAGAAATGTGAGATTGCAAAGATTGCTGTTAAGAAAGGAGTACAGAATACTAACAGTGAGCTGATGGCTAAAGAATTGCAGTGGTTAACTGGAGGAACCCTACTTACACGTGATAAGGAGTATATTGTTCTTTATAGAGGTAAAGATTTCCTCCCATCTTCAGTTTCTTCAGCAATCGAACAGAGAAGAAACCATGGAGTTGATGAGTTTCAAAGGAACAAAACTCCAAACTCATCGTCAAATCCTCCACAAATCAATCAAGATAATGGAACCCAAAGCTCCTCTGTTGCCAAAATTGGTGACATTAATGACCAAAAACTAGAAATTGCCATTGAACAAAGGAAACAAAGGTCACGTGAAGCAGCTATTAAGAAGACTAGTTCCAAATTGTCTCAGGCATTGGAGAACAAAGAAAAGGCAGAGAAGCTTCTAGAAGAATTGGAGAAAGAAGAAACAAAACAACAATTTGAAGTAGATAAAGAGGGTATCACTGAAGAGGAAAGATACATGTTGAGGAAAGTTGGGATGAAGATGAAGCCTTTCCTACTTTTGGGTAGACGTGGGGTTTTTGATGGAACTGTTGAAAACATGCATCTTCATTGGAAATACAGAGAGCTTGTGAAGATATTATCTGGTGAATCCACCATTGATGAGCTTCATGCAATTGCAAGAACATTAGAAGCAGAAAGTGGTGGAATATTAGTTGCAATAGAACGCATGAGAAAAGGTCATGCAATTATTATTTATCGTGGAAAAAATTATAAAAGGCCACCTTCTTTAAGGCCTCAAACACTTCTTAATAAAAGAGAAGCATTAAAACGTTCCATTGAAGCACAACGTACACAGTCGTTGAAACTTCATGTGTTGAAGCTTGGGAAAAATGTTGAGGAATTGAAGCTCAAGTTGGCCAAAAATGAGGAAATCTGCATACAGGGTGAAAAAGATGAAGTGGCTGAGGCCAAAAATGAGGAAATCAGCATACATGGTGAAAAAGATGATGTGACGGAGGAGCATGAGATGGAGAAAAGCTCATCAAGTGAATGTATGGAAGAAAGTAATACAAATATTGAACTTCATAGTCCAAATCCTACAACATTGAAAGAAATTGAGGTTGATGAAGATGAAGATGATTTACATTTTTCAAACAAAAATGATGGATTTTTACAATTTGCATCATCCGAAGAAACAAATTGTCAAAAACATGCTGACAAGGATGAAAGTGCATCATTGTTAACCAATAAAACCGAGTTGCGAGTTACCGAGTCAAACGGGAGACAACACAGATCGGCTCTTCTTTCCAATAAAGAAAGGCTGCTTTTGAGGAAACAAGCACTTAAAACCACAAAACGCCCTGTTCTTGCTGTTGGGAGAAGCAATATTGTTAGTGGGGTGGCTAAAACAATTAAAACTCATTTCCAAAAACACCCTCTTGCTATTGTGAATATCAAAGGAAGAGCCAAAGGGACTTCAGTGCAACAACTGGTTTCAAAGCTAGAGGAGGCAACAGGGGCAATTTTGGTTTCACAAGAACCGAATAAGGTTATTTTGTATAGGGGTTGGGGGGCTACCACAACCACAACCACAACACGGGATTATAATAAAAAAGTTAATGAGAGACATGAAGATAAAGAAGGGATTGTTAAAAAGACGATAATCTCCCCGGAACTTATTTCAGCGATTAGATTTGAATGTGGACTGGAGGGTAATATAGTCCATGAGCGTGAAGGAGTTTCTTAG

Protein:   MLLQQPSPCPKTLPNPFLSHLHLPRNLLPRTPYHFRRSSFLLHASASSADTKSLPQSAIRRIADKLRSLGYVEDDSNKQQSSAPEVTLVTSPGEIFVPLPNRIPKYRVGHTLDPSWSTPENPVPEPGSGNAIRRYHELRREVWKEKKEEKVKRSLEGNGESENVPTMAELKLPPAELRRLRGLGIAVKQKLKIGKAGITEGIVNGIHERWRRTELVKIVCEDLCRLNMRRTHDLLERKTGGLVVWRSGSIIILYRGTDYKYPYFFVKPNDASVDEPMSSSTNSEDSGVQTRTTTEPEPPLIQGVGSRTRVRFQLPGEKQLMEESDQLLQGLGPRFTDWYGYEPLPVDADLLPAIVPGYRKPFRLLPFGVQPKLTNDEMTILRRLGRPLPCHFALGRNRKHQGLAAAILKLWEKCEIAKIAVKKGVQNTNSELMAKELQWLTGGTLLTRDKEYIVLYRGKDFLPSSVSSAIEQRRNHGVDEFQRNKTPNSSSNPPQINQDNGTQSSSVAKIGDINDQKLEIAIEQRKQRSREAAIKKTSSKLSQALENKEKAEKLLEELEKEETKQQFEVDKEGITEEERYMLRKVGMKMKPFLLLGRRGVFDGTVENMHLHWKYRELVKILSGESTIDELHAIARTLEAESGGILVAIERMRKGHAIIIYRGKNYKRPPSLRPQTLLNKREALKRSIEAQRTQSLKLHVLKLGKNVEELKLKLAKNEEICIQGEKDEVAEAKNEEISIHGEKDDVTEEHEMEKSSSSECMEESNTNIELHSPNPTTLKEIEVDEDEDDLHFSNKNDGFLQFASSEETNCQKHADKDESASLLTNKTELRVTESNGRQHRSALLSNKERLLLRKQALKTTKRPVLAVGRSNIVSGVAKTIKTHFQKHPLAIVNIKGRAKGTSVQQLVSKLEEATGAILVSQEPNKVILYRGWGATTTTTTTRDYNKKVNERHEDKEGIVKKTIISPELISAIRFECGLEGNIVHEREGVS